STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB25523.1Porin; PFAM: porin; KEGG: mex:Mext_4443 porin. (245 aa)    
Predicted Functional Partners:
ACB25143.1
PFAM: protein of unknown function DUF1150; KEGG: mex:Mext_1621 protein of unknown function DUF1150.
  
     0.771
ACB22291.1
KEGG: mex:Mext_2318 hypothetical protein.
  
     0.768
ACB23652.1
PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein.
  
     0.750
ACB22552.1
KEGG: mex:Mext_3152 hypothetical protein.
  
     0.748
ACB22886.1
KEGG: mex:Mext_0926 hypothetical protein.
  
     0.742
ACB27575.1
KEGG: mex:Mext_4236 hypothetical protein.
  
     0.734
ACB27584.1
Putative CheA signal transduction histidine kinase; KEGG: mex:Mext_1000 hypothetical protein.
  
     0.733
ACB27046.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.731
ACB25478.1
PFAM: protein of unknown function DUF423; KEGG: mex:Mext_2349 protein of unknown function DUF423.
  
     0.730
ACB26708.1
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
 
 0.726
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.