STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB27467.1PFAM: periplasmic binding protein; KEGG: mex:Mext_3842 periplasmic binding protein. (361 aa)    
Predicted Functional Partners:
ACB27465.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3844 ABC transporter related.
 
 
 0.997
ACB27466.1
PFAM: transport system permease protein; KEGG: mex:Mext_3843 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.995
ACB26555.1
PFAM: transport system permease protein; KEGG: smd:Smed_2340 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.973
ACB27468.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0464 glyoxalase/bleomycin resistance protein/dioxygenase.
       0.800
ACB25072.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.735
ACB25775.1
PFAM: iron permease FTR1; KEGG: azc:AZC_2743 high-affinity Fe2+/Pb2+ permease.
   
  
 0.722
hmuV
ABC transporter related; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.607
ACB23738.1
PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain protein.
 
     0.563
ACB27469.1
PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_4293 heat shock protein DnaJ domain protein.
     
 0.529
ACB25933.1
TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: mex:Mext_3167 riboflavin synthase, alpha subunit.
  
  
 0.486
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.