STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB27549.1PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpc:RPC_0967 transglutaminase-like. (309 aa)    
Predicted Functional Partners:
ACB23617.1
PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_3416 protein of unknown function DUF404.
 
  
 0.898
ACB27548.1
PFAM: transglutaminase domain protein; KEGG: mex:Mext_2611 transglutaminase domain protein.
 
     0.897
ACB22595.1
PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_2208 protein of unknown function DUF404.
 
  
 0.830
ACB22594.1
PFAM: protein of unknown function DUF403; KEGG: mex:Mext_2209 protein of unknown function DUF403.
 
  
 0.821
ACB24909.1
PFAM: transglutaminase domain protein; KEGG: mex:Mext_2618 transglutaminase domain protein.
 
     0.776
ACB24443.1
PFAM: transglutaminase domain protein; KEGG: mex:Mext_2611 transglutaminase domain protein.
 
     0.772
ACB25455.1
PFAM: transglutaminase domain protein; KEGG: mlo:mll4861 hypothetical protein.
 
     0.770
ACB27550.1
PFAM: response regulator receiver; KEGG: mex:Mext_2557 response regulator receiver.
       0.617
ACB23615.1
KEGG: mex:Mext_3414 hypothetical protein.
 
     0.503
ACB22592.1
KEGG: mex:Mext_2215 putative proteasome-type protease.
 
    0.497
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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