STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB27607.1KEGG: rpc:RPC_2422 hypothetical protein. (132 aa)    
Predicted Functional Partners:
ACB27608.1
PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2923 PepSY-associated TM helix domain protein.
       0.756
ACB27606.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2924 TonB-dependent receptor.
       0.651
ACB27609.1
KEGG: mex:Mext_2922 hypothetical protein.
       0.650
ACB27605.1
PFAM: protein of unknown function DUF534; KEGG: bja:bll7751 hypothetical protein.
       0.427
ACB27603.1
PFAM: response regulator receiver; KEGG: bja:bsr2863 two-component response regulator.
       0.420
ACB27602.1
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: bja:blr2864 two-component response regulator.
       0.406
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.