STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR65326.1PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmp:MMP1014 hypothetical protein. (355 aa)    
Predicted Functional Partners:
ABR65909.1
PFAM: PUA domain containing protein; Queuine/other tRNA-ribosyltransferase; KEGG: mmp:MMP1595 archaeosine tRNA-ribosyltransferase.
 
     0.835
ABR66019.1
PFAM: Protein of unknown function UPF0179; KEGG: mmp:MMP1679 hypothetical protein; Belongs to the UPF0179 family.
  
     0.706
rpl40e
KEGG: mmp:MMP0151 LSU ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
     0.698
mptD
Protein of unknown function DUF372; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family.
  
     0.671
rps24e
PFAM: Ribosomal protein S24e; KEGG: mmp:MMP0443 SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
  
     0.651
ABR66758.1
PFAM: helix-turn-helix domain protein; KEGG: mmp:MMP0678 predicted transcriptional regulator; helix-turn-helix motif.
  
     0.651
ABR65926.1
PFAM: protein of unknown function DUF75; KEGG: mmp:MMP1611 hypothetical protein.
  
     0.646
rpl44e
Ribosomal protein L44E; Binds to the 23S rRNA.
  
     0.617
carB
TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; RimK domain protein ATP-grasp; KEGG: mmp:MMP1013 carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
       0.610
ABR65819.1
PFAM: Protein of unknown function DUF357; KEGG: mmp:MMP1508 hypothetical protein.
  
     0.610
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.