STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR66231.1TIGRFAM: daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; KEGG: mmp:MMP0165 ABC transporter, family 2. (253 aa)    
Predicted Functional Partners:
ABR66233.1
TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP0167 ABC transporter ATP binding protein family member.
 
  
 0.992
ABR66232.1
TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mmp:MMP0166 MatE family member (drug/sodium antiporters).
 
  
 0.939
ABR66234.1
PFAM: transcriptional regulator PadR family protein; KEGG: mmp:MMP0168 transcriptional regulator PadR-like family.
 
  
 0.894
ABR65380.1
PFAM: protein of unknown function DUF181; KEGG: mmp:MMP1056 hypothetical protein.
  
  
 0.812
ABR66180.1
PFAM: nitroreductase; KEGG: mmp:MMP0115 hypothetical protein.
  
  
 0.743
ABR66486.1
PFAM: nitroreductase; KEGG: mmp:MMP0426 nitroreductase family.
  
  
 0.743
ABR66235.1
PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: mmp:MMP0169 hypothetical protein.
       0.554
cbiX
Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2+) into sirohydrochlorin to yield Ni- sirohydrochlorin.
       0.553
ABR65485.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mmp:MMP1168 ABC transporter ATP-binding protein.
     
 0.513
ABR66236.1
TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mmp:MMP0170 gamma-F420-2:alpha-L-glutamate ligase.
       0.513
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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