Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABR66300.1KEGG: mmp:MMP0235 hypothetical protein. (293 aa)    
Predicted Functional Partners:
ABR66299.1
KEGG: mmp:MMP0234 hypothetical protein.
     
 0.956
ABR66296.1
PFAM: cysteine-rich small domain; KEGG: mmp:MMP0231 hypothetical protein.
     
 0.937
ABR66301.1
PFAM: Protein of unknown function DUF361; KEGG: mmp:MMP0236 hypothetical protein.
     
 0.935
ABR66298.1
PFAM: Protein of unknown function DUF361; KEGG: mmp:MMP0233 hypothetical protein.
     
 0.902
ABR66303.1
KEGG: mmp:MMP0238 hypothetical protein.
     
 0.863
ABR66302.1
KEGG: mmp:MMP0237 hypothetical protein.
     
 0.834
ABR66297.1
PFAM: peptidase A24A prepilin type IV; KEGG: mmp:MMP0232 putative archaeal signal peptidase.
       0.813
ABR66306.1
KEGG: mmp:MMP0241 hypothetical protein.
  
  
 0.753
ABR66305.1
KEGG: mmp:MMP0240 hypothetical protein.
  
  
 0.750
ABR66304.1
KEGG: mmp:MMP0239 hypothetical protein.
     
 0.732
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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