STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR66815.1PFAM: elongation factor Tu domain 2 protein; KEGG: mmp:MMP0738 elongation factor Tu, domain 2. (309 aa)    
Predicted Functional Partners:
ABR66049.1
PFAM: RNA binding S1 domain protein; Eukaryotic translation initiation factor 2, alpha subunit; KEGG: mmp:MMP1707 translation initiation factor aIF-2, subunit alpha.
   
 0.969
rps3
Ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.966
rps6e
PFAM: Ribosomal protein S6e; KEGG: mmp:MMP1207 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.958
rps2
PFAM: ribosomal protein S2; KEGG: mmp:MMP0667 SSU ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
 
 0.958
rps10
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
 
 0.956
rps28e
PFAM: Ribosomal protein S28e; KEGG: mmp:MMP0640 SSU ribosomal protein S28E; Belongs to the eukaryotic ribosomal protein eS28 family.
 
 0.956
rpl7ae
Ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
 
 0.956
rps12
Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
  
 0.954
rps17
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
 0.954
rps9
PFAM: ribosomal protein S9; KEGG: mmp:MMP1325 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
  
 0.952
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.