Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00109 | PTRG_00571 | B2VRC8 | B2VQM0 | UDP-glucose,sterol transferase. | Endopolyphosphatase. | 0.456 |
PTRG_00109 | PTRG_02658 | B2VRC8 | B2VZ18 | UDP-glucose,sterol transferase. | 3-keto-steroid reductase. | 0.455 |
PTRG_00109 | PTRG_03553 | B2VRC8 | B2W2A5 | UDP-glucose,sterol transferase. | Vi polysaccharide biosynthesis protein vipA/tviB. | 0.508 |
PTRG_00109 | PTRG_03930 | B2VRC8 | B2W0E5 | UDP-glucose,sterol transferase. | Dihydroceramide delta(4)-desaturase. | 0.455 |
PTRG_00109 | PTRG_04197 | B2VRC8 | B2W162 | UDP-glucose,sterol transferase. | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein. | 0.462 |
PTRG_00109 | PTRG_04486 | B2VRC8 | B2W4D6 | UDP-glucose,sterol transferase. | 3-oxoacyl-(Acyl-carrier-protein) reductase. | 0.489 |
PTRG_00109 | PTRG_07820 | B2VRC8 | B2WCW1 | UDP-glucose,sterol transferase. | Uncharacterized protein. | 0.460 |
PTRG_00109 | PTRG_09685 | B2VRC8 | B2WI76 | UDP-glucose,sterol transferase. | Sorting nexin-41. | 0.432 |
PTRG_00109 | PTRG_11012 | B2VRC8 | B2WM02 | UDP-glucose,sterol transferase. | Ceramide glucosyltransferase. | 0.499 |
PTRG_00109 | PTRG_11203 | B2VRC8 | B2WMJ3 | UDP-glucose,sterol transferase. | Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.464 |
PTRG_00571 | PTRG_00109 | B2VQM0 | B2VRC8 | Endopolyphosphatase. | UDP-glucose,sterol transferase. | 0.456 |
PTRG_00571 | PTRG_03930 | B2VQM0 | B2W0E5 | Endopolyphosphatase. | Dihydroceramide delta(4)-desaturase. | 0.817 |
PTRG_00571 | PTRG_11012 | B2VQM0 | B2WM02 | Endopolyphosphatase. | Ceramide glucosyltransferase. | 0.857 |
PTRG_02658 | PTRG_00109 | B2VZ18 | B2VRC8 | 3-keto-steroid reductase. | UDP-glucose,sterol transferase. | 0.455 |
PTRG_02658 | PTRG_04486 | B2VZ18 | B2W4D6 | 3-keto-steroid reductase. | 3-oxoacyl-(Acyl-carrier-protein) reductase. | 0.858 |
PTRG_02658 | PTRG_07820 | B2VZ18 | B2WCW1 | 3-keto-steroid reductase. | Uncharacterized protein. | 0.852 |
PTRG_02658 | PTRG_11203 | B2VZ18 | B2WMJ3 | 3-keto-steroid reductase. | Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.892 |
PTRG_03553 | PTRG_00109 | B2W2A5 | B2VRC8 | Vi polysaccharide biosynthesis protein vipA/tviB. | UDP-glucose,sterol transferase. | 0.508 |
PTRG_03930 | PTRG_00109 | B2W0E5 | B2VRC8 | Dihydroceramide delta(4)-desaturase. | UDP-glucose,sterol transferase. | 0.455 |
PTRG_03930 | PTRG_00571 | B2W0E5 | B2VQM0 | Dihydroceramide delta(4)-desaturase. | Endopolyphosphatase. | 0.817 |
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