Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00121 | PTRG_00657 | B2VRE0 | B2VSF3 | DAO domain-containing protein. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.549 |
PTRG_00121 | PTRG_01122 | B2VRE0 | B2VUY5 | DAO domain-containing protein. | 5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.694 |
PTRG_00121 | PTRG_02140 | B2VRE0 | B2VUN6 | DAO domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.706 |
PTRG_00121 | PTRG_04132 | B2VRE0 | B2W0Z7 | DAO domain-containing protein. | Purine catabolism protein pucG. | 0.762 |
PTRG_00121 | PTRG_04632 | B2VRE0 | B2W4T2 | DAO domain-containing protein. | DAO domain-containing protein. | 0.701 |
PTRG_00121 | PTRG_05910 | B2VRE0 | B2W7X2 | DAO domain-containing protein. | Dimethylglycine dehydrogenase, mitochondrial. | 0.801 |
PTRG_00121 | PTRG_06211 | B2VRE0 | B2W653 | DAO domain-containing protein. | Tryptophan synthase. | 0.780 |
PTRG_00121 | PTRG_06407 | B2VRE0 | B2W8U9 | DAO domain-containing protein. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.706 |
PTRG_00121 | PTRG_07718 | B2VRE0 | B2WCK9 | DAO domain-containing protein. | Threonine aldolase. | 0.709 |
PTRG_00121 | PTRG_08494 | B2VRE0 | B2WEC1 | DAO domain-containing protein. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.707 |
PTRG_00657 | PTRG_00121 | B2VSF3 | B2VRE0 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | DAO domain-containing protein. | 0.549 |
PTRG_00657 | PTRG_02140 | B2VSF3 | B2VUN6 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.927 |
PTRG_00657 | PTRG_04132 | B2VSF3 | B2W0Z7 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Purine catabolism protein pucG. | 0.907 |
PTRG_00657 | PTRG_04632 | B2VSF3 | B2W4T2 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | DAO domain-containing protein. | 0.524 |
PTRG_00657 | PTRG_06211 | B2VSF3 | B2W653 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Tryptophan synthase. | 0.817 |
PTRG_00657 | PTRG_06407 | B2VSF3 | B2W8U9 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.927 |
PTRG_00657 | PTRG_07718 | B2VSF3 | B2WCK9 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Threonine aldolase. | 0.735 |
PTRG_00657 | PTRG_08494 | B2VSF3 | B2WEC1 | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.998 |
PTRG_01122 | PTRG_00121 | B2VUY5 | B2VRE0 | 5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | DAO domain-containing protein. | 0.694 |
PTRG_01122 | PTRG_02140 | B2VUY5 | B2VUN6 | 5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.832 |
page 1 of 6