STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_00081AP-1 complex subunit gamma. (844 aa)    
Predicted Functional Partners:
PTRG_09815
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.999
PTRG_11063
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.999
PTRG_06717
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.984
PTRG_01747
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.981
PTRG_01168
AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
   
 0.981
PTRG_05300
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.981
PTRG_08791
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.981
PTRG_00097
Adaptor protein complex 3 Mu3A; Belongs to the adaptor complexes medium subunit family.
   
 0.979
PTRG_00461
Rad60-SLD_2 domain-containing protein.
   
 0.955
PTRG_01971
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
0.955
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.