STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_00309ANK_REP_REGION domain-containing protein. (1115 aa)    
Predicted Functional Partners:
PTRG_11412
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.751
PTRG_04216
Ankyrin repeat protein nuc-2.
    
 0.568
PTRG_05368
Protein kinase domain-containing protein.
    
 0.558
PTRG_00414
Serine/threonine-protein phosphatase.
    
  0.552
PTRG_05107
Rho-type GTPase-activating protein 2.
    
 0.544
PTRG_01491
Ubiquitin.
   
 0.516
PTRG_07477
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.509
PTRG_11523
Neural cell expressed.
    
  0.504
PTRG_00816
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.493
PTRG_01082
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
    
  0.493
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.