STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_00356Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
PTRG_09925
Tyrosine-protein phosphatase CDC14.
   
 0.796
PTRG_00885
Uncharacterized protein.
    
 0.759
PTRG_05687
Maintenance of ploidy protein MOB2.
    
 0.759
PTRG_05846
Septum-promoting GTP-binding protein 1.
    
 0.719
PTRG_03674
JmjC domain-containing histone demethylation protein 3D.
    
 0.655
PTRG_03840
mRNA stability protein; Plays an essential role in initiation of the G0 program by preventing the degradation of specific nutrient-regulated mRNAs via the 5'-3' mRNA decay pathway.
    
 0.640
PTRG_01361
Uncharacterized protein.
    
 0.556
PTRG_04099
GTP-binding protein rho1.
    
 0.556
PTRG_07374
Cell division control protein 42.
    
 0.556
PTRG_07107
GTP-binding protein rho3.
    
 0.556
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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