Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00360 | PTRG_04208 | B2VS21 | B2W173 | Zn(2)-C6 fungal-type domain-containing protein. | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.461 |
PTRG_00360 | PTRG_04681 | B2VS21 | B2W4Y1 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.425 |
PTRG_00360 | PTRG_06292 | B2VS21 | B2W8I4 | Zn(2)-C6 fungal-type domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.444 |
PTRG_00360 | PTRG_06552 | B2VS21 | B2W994 | Zn(2)-C6 fungal-type domain-containing protein. | BUD22 domain-containing protein. | 0.425 |
PTRG_00360 | PTRG_07544 | B2VS21 | B2WC35 | Zn(2)-C6 fungal-type domain-containing protein. | Zn-dependent hydrolases. | 0.457 |
PTRG_00360 | PTRG_08114 | B2VS21 | B2WDQ5 | Zn(2)-C6 fungal-type domain-containing protein. | Peroxisomal targeting signal receptor. | 0.454 |
PTRG_00360 | PTRG_09492 | B2VS21 | B2WHN3 | Zn(2)-C6 fungal-type domain-containing protein. | Adrenodoxin. | 0.457 |
PTRG_00360 | PTRG_09711 | B2VS21 | B2WIA2 | Zn(2)-C6 fungal-type domain-containing protein. | 3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.489 |
PTRG_00360 | PTRG_11197 | B2VS21 | B2WMI7 | Zn(2)-C6 fungal-type domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.444 |
PTRG_00360 | PTRG_12091 | B2VS21 | B2WQ23 | Zn(2)-C6 fungal-type domain-containing protein. | Peroxisome assembly protein 12. | 0.443 |
PTRG_04208 | PTRG_00360 | B2W173 | B2VS21 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Zn(2)-C6 fungal-type domain-containing protein. | 0.461 |
PTRG_04208 | PTRG_06292 | B2W173 | B2W8I4 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.617 |
PTRG_04208 | PTRG_07544 | B2W173 | B2WC35 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Zn-dependent hydrolases. | 0.686 |
PTRG_04208 | PTRG_08114 | B2W173 | B2WDQ5 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Peroxisomal targeting signal receptor. | 0.999 |
PTRG_04208 | PTRG_09492 | B2W173 | B2WHN3 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Adrenodoxin. | 0.686 |
PTRG_04208 | PTRG_09711 | B2W173 | B2WIA2 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.594 |
PTRG_04208 | PTRG_11197 | B2W173 | B2WMI7 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.617 |
PTRG_04208 | PTRG_12091 | B2W173 | B2WQ23 | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | Peroxisome assembly protein 12. | 0.983 |
PTRG_04681 | PTRG_00360 | B2W4Y1 | B2VS21 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.425 |
PTRG_06292 | PTRG_00360 | B2W8I4 | B2VS21 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Zn(2)-C6 fungal-type domain-containing protein. | 0.444 |
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