Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00647 | PTRG_00655 | B2VSE3 | B2VSF1 | Peptidase; Belongs to the peptidase S8 family. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.507 |
PTRG_00647 | PTRG_01891 | B2VSE3 | B2VT55 | Peptidase; Belongs to the peptidase S8 family. | Small nucleolar ribonucleoprotein complex subunit (SOF1). | 0.507 |
PTRG_00647 | PTRG_02021 | B2VSE3 | B2VTX6 | Peptidase; Belongs to the peptidase S8 family. | U3 snoRNP protein Utp20. | 0.525 |
PTRG_00647 | PTRG_02879 | B2VSE3 | B2VZN9 | Peptidase; Belongs to the peptidase S8 family. | PINc domain-containing protein. | 0.507 |
PTRG_00647 | PTRG_03556 | B2VSE3 | B2W2A8 | Peptidase; Belongs to the peptidase S8 family. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.507 |
PTRG_00647 | PTRG_04216 | B2VSE3 | B2W181 | Peptidase; Belongs to the peptidase S8 family. | Ankyrin repeat protein nuc-2. | 0.565 |
PTRG_00647 | PTRG_04698 | B2VSE3 | B2W4Z8 | Peptidase; Belongs to the peptidase S8 family. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.507 |
PTRG_00647 | PTRG_04973 | B2VSE3 | B2W3C3 | Peptidase; Belongs to the peptidase S8 family. | Nitrate reductase. | 0.810 |
PTRG_00647 | PTRG_05577 | B2VSE3 | B2W6Y9 | Peptidase; Belongs to the peptidase S8 family. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.507 |
PTRG_00647 | PTRG_11412 | B2VSE3 | B2WNF5 | Peptidase; Belongs to the peptidase S8 family. | Glycerophosphodiester phosphodiesterase GDE1. | 0.834 |
PTRG_00655 | PTRG_00647 | B2VSF1 | B2VSE3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Peptidase; Belongs to the peptidase S8 family. | 0.507 |
PTRG_00655 | PTRG_01891 | B2VSF1 | B2VT55 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Small nucleolar ribonucleoprotein complex subunit (SOF1). | 0.999 |
PTRG_00655 | PTRG_02021 | B2VSF1 | B2VTX6 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 snoRNP protein Utp20. | 0.999 |
PTRG_00655 | PTRG_02879 | B2VSF1 | B2VZN9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | PINc domain-containing protein. | 0.999 |
PTRG_00655 | PTRG_03556 | B2VSF1 | B2W2A8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.998 |
PTRG_00655 | PTRG_04698 | B2VSF1 | B2W4Z8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.999 |
PTRG_00655 | PTRG_05577 | B2VSF1 | B2W6Y9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.998 |
PTRG_01891 | PTRG_00647 | B2VT55 | B2VSE3 | Small nucleolar ribonucleoprotein complex subunit (SOF1). | Peptidase; Belongs to the peptidase S8 family. | 0.507 |
PTRG_01891 | PTRG_00655 | B2VT55 | B2VSF1 | Small nucleolar ribonucleoprotein complex subunit (SOF1). | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
PTRG_01891 | PTRG_02021 | B2VT55 | B2VTX6 | Small nucleolar ribonucleoprotein complex subunit (SOF1). | U3 snoRNP protein Utp20. | 0.998 |
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