STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_0068910 kDa chaperonin; Belongs to the GroES chaperonin family. (170 aa)    
Predicted Functional Partners:
PTRG_01222
Heat shock protein 60, mitochondrial; Belongs to the chaperonin (HSP60) family.
 
 
 0.998
PTRG_10332
Uncharacterized protein.
   
 
 0.983
PTRG_05812
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.970
PTRG_08879
T-complex protein 1 subunit alpha.
  
 
 0.886
PTRG_03220
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
  
 
 0.882
PTRG_02546
T-complex protein 1 subunit gamma.
  
 
 0.882
PTRG_02777
T-complex protein 1 subunit beta.
  
 
 0.882
PTRG_06327
T-complex protein 1 subunit zeta.
  
 
 0.882
PTRG_06774
T-complex protein 1 subunit epsilon.
  
 
 0.882
PTRG_08118
T-complex protein 1 subunit delta.
  
 
 0.882
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.