STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_00697L-ascorbate oxidase; Belongs to the multicopper oxidase family. (576 aa)    
Predicted Functional Partners:
PTRG_10370
Plasma membrane iron permease.
   
 
 0.591
PTRG_04705
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.571
PTRG_11123
Trypsin; Belongs to the peptidase S1 family.
    
 0.546
PTRG_03204
Variant surface antigen E.
    
 0.542
PTRG_10774
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.459
PTRG_01408
Golgi transport protein Sly; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.444
PTRG_05299
Arabinogalactan endo-1,4-beta-galactosidase.
     
 0.425
PTRG_09601
Nitrate/nitrite transporter.
     
 0.422
PTRG_05692
Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.421
PTRG_07387
Uncharacterized protein.
     
 0.421
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.