STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_00857Uncharacterized protein. (320 aa)    
Predicted Functional Partners:
PTRG_09389
SCA7 domain-containing protein.
    
 0.568
PTRG_02255
Transcription factor spt3.
    
  0.563
PTRG_09854
Pheromone receptor PREB.
    
 0.541
PTRG_10896
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
    
 0.531
PTRG_00996
Uracil phosphoribosyltransferase.
    
 0.504
PTRG_05751
Uracil phosphoribosyltransferase.
    
 0.504
PTRG_08949
Uridine kinase; Belongs to the uridine kinase family.
    
 0.504
PTRG_08791
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.489
PTRG_04653
Uncharacterized protein.
    
 0.479
PTRG_01020
Ankyrin repeat domain containing protein.
    
 0.475
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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