Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01997 | PTRG_02423 | B2VTV2 | B2VYD3 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
PTRG_01997 | PTRG_02670 | B2VTV2 | B2VZ30 | 3-hydroxyacyl-CoA dehydrogenase. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
PTRG_01997 | PTRG_04208 | B2VTV2 | B2W173 | 3-hydroxyacyl-CoA dehydrogenase. | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.857 |
PTRG_01997 | PTRG_04336 | B2VTV2 | B2W1K1 | 3-hydroxyacyl-CoA dehydrogenase. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.877 |
PTRG_01997 | PTRG_05182 | B2VTV2 | B2W3Y2 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase 1; Belongs to the thiolase-like superfamily. Thiolase family. | 0.904 |
PTRG_01997 | PTRG_05335 | B2VTV2 | B2W697 | 3-hydroxyacyl-CoA dehydrogenase. | Acetyl-coenzyme A synthetase. | 0.864 |
PTRG_01997 | PTRG_06723 | B2VTV2 | B2W9R5 | 3-hydroxyacyl-CoA dehydrogenase. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.877 |
PTRG_01997 | PTRG_07960 | B2VTV2 | B2WDA1 | 3-hydroxyacyl-CoA dehydrogenase. | Acetyl-CoA acetyltransferase IB; Belongs to the thiolase-like superfamily. Thiolase family. | 0.916 |
PTRG_01997 | PTRG_08516 | B2VTV2 | B2WEE3 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 0.911 |
PTRG_01997 | PTRG_11572 | B2VTV2 | B2WNL2 | 3-hydroxyacyl-CoA dehydrogenase. | Uncharacterized protein. | 0.873 |
PTRG_02423 | PTRG_01997 | B2VYD3 | B2VTV2 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.911 |
PTRG_02423 | PTRG_02670 | B2VYD3 | B2VZ30 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.820 |
PTRG_02423 | PTRG_04208 | B2VYD3 | B2W173 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.918 |
PTRG_02423 | PTRG_04336 | B2VYD3 | B2W1K1 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.896 |
PTRG_02423 | PTRG_05182 | B2VYD3 | B2W3Y2 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase 1; Belongs to the thiolase-like superfamily. Thiolase family. | 0.803 |
PTRG_02423 | PTRG_05335 | B2VYD3 | B2W697 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-coenzyme A synthetase. | 0.859 |
PTRG_02423 | PTRG_06723 | B2VYD3 | B2W9R5 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. | 0.889 |
PTRG_02423 | PTRG_07960 | B2VYD3 | B2WDA1 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA acetyltransferase IB; Belongs to the thiolase-like superfamily. Thiolase family. | 0.819 |
PTRG_02423 | PTRG_08516 | B2VYD3 | B2WEE3 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | 0.804 |
PTRG_02423 | PTRG_11572 | B2VYD3 | B2WNL2 | 3-ketoacyl-CoA thiolase B; Belongs to the thiolase-like superfamily. Thiolase family. | Uncharacterized protein. | 0.492 |
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