Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01082 | PTRG_02237 | B2VUU5 | B2VV54 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | HTH CENPB-type domain-containing protein. | 0.759 |
PTRG_01082 | PTRG_03829 | B2VUU5 | B2W331 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.664 |
PTRG_01082 | PTRG_08038 | B2VUU5 | B2WDH9 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Uncharacterized protein. | 0.919 |
PTRG_01082 | PTRG_11675 | B2VUU5 | B2WNW5 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Zn(2)-C6 fungal-type domain-containing protein. | 0.919 |
PTRG_02237 | PTRG_01082 | B2VV54 | B2VUU5 | HTH CENPB-type domain-containing protein. | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | 0.759 |
PTRG_02237 | PTRG_02492 | B2VV54 | B2VYK2 | HTH CENPB-type domain-containing protein. | Uncharacterized protein. | 0.579 |
PTRG_02237 | PTRG_02542 | B2VV54 | B2VYQ2 | HTH CENPB-type domain-containing protein. | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | 0.794 |
PTRG_02237 | PTRG_03829 | B2VV54 | B2W331 | HTH CENPB-type domain-containing protein. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.798 |
PTRG_02237 | PTRG_06292 | B2VV54 | B2W8I4 | HTH CENPB-type domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.581 |
PTRG_02237 | PTRG_08038 | B2VV54 | B2WDH9 | HTH CENPB-type domain-containing protein. | Uncharacterized protein. | 0.639 |
PTRG_02237 | PTRG_10814 | B2VV54 | B2WLF4 | HTH CENPB-type domain-containing protein. | Pre-mRNA-splicing factor ISY1. | 0.794 |
PTRG_02237 | PTRG_11197 | B2VV54 | B2WMI7 | HTH CENPB-type domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.581 |
PTRG_02237 | PTRG_11333 | B2VV54 | B2WMX3 | HTH CENPB-type domain-containing protein. | Mob1 family protein. | 0.798 |
PTRG_02237 | PTRG_11675 | B2VV54 | B2WNW5 | HTH CENPB-type domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.639 |
PTRG_02492 | PTRG_02237 | B2VYK2 | B2VV54 | Uncharacterized protein. | HTH CENPB-type domain-containing protein. | 0.579 |
PTRG_02492 | PTRG_03829 | B2VYK2 | B2W331 | Uncharacterized protein. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.575 |
PTRG_02542 | PTRG_02237 | B2VYQ2 | B2VV54 | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | HTH CENPB-type domain-containing protein. | 0.794 |
PTRG_03829 | PTRG_01082 | B2W331 | B2VUU5 | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | 0.664 |
PTRG_03829 | PTRG_02237 | B2W331 | B2VV54 | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | HTH CENPB-type domain-containing protein. | 0.798 |
PTRG_03829 | PTRG_02492 | B2W331 | B2VYK2 | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.575 |
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