STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_01238NEDD8-activating enzyme E1 regulatory subunit. (412 aa)    
Predicted Functional Partners:
PTRG_00814
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
0.999
PTRG_08907
Ubiquitin-like modifier SUMO.
   
 0.989
PTRG_03829
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
  
 0.987
cnxH
Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.
  
 0.954
PTRG_05025
Elongation factor 3.
   
 
 0.894
PTRG_09373
Autophagy-related protein 3.
    
 0.863
PTRG_01433
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.849
PTRG_07477
UBIQUITIN_CONJUGAT_2 domain-containing protein.
  
 0.842
PTRG_01627
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
    
 0.819
PTRG_06487
Thyroid hormone receptor interactor 12.
    
 0.773
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.