STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_01536MCU domain-containing protein. (527 aa)    
Predicted Functional Partners:
PTRG_11487
Prohibitin.
     
 0.733
PTRG_10155
FYVE-type domain-containing protein.
     
 0.727
PTRG_10605
FYVE zinc finger protein.
     
 0.727
PTRG_05489
Prohibitin.
     
 0.685
PTRG_00015
Cell division protease ftsH.
     
 0.679
PTRG_01850
Stomatin family protein.
     
 0.533
PTRG_01851
Stomatin family protein.
     
 0.533
PTRG_00950
Stomatin family protein.
     
 0.533
PTRG_02837
Uncharacterized protein.
    
 
 0.466
PTRG_01522
Cell division protease ftsH.
     
 0.460
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.