Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00971 | PTRG_01670 | B2VU47 | B2VWV8 | RING-box protein 1. | WLM domain-containing protein. | 0.726 |
PTRG_00971 | PTRG_01791 | B2VU47 | B2VSN5 | RING-box protein 1. | PCI domain-containing protein. | 0.946 |
PTRG_00971 | PTRG_05501 | B2VU47 | B2W6R3 | RING-box protein 1. | Cullin-4B; Belongs to the cullin family. | 0.984 |
PTRG_00971 | PTRG_07081 | B2VU47 | B2WBR8 | RING-box protein 1. | COP9 signalosome subunit 1. | 0.970 |
PTRG_00971 | PTRG_07106 | B2VU47 | B2WBU3 | RING-box protein 1. | COP9 signalosome complex subunit 2. | 0.969 |
PTRG_00971 | PTRG_07574 | B2VU47 | B2WC65 | RING-box protein 1. | COP9 signalosome complex subunit 4. | 0.981 |
PTRG_00971 | PTRG_08974 | B2VU47 | B2WGB8 | RING-box protein 1. | DNA damage-binding protein 1. | 0.998 |
PTRG_00971 | PTRG_09772 | B2VU47 | B2WIG3 | RING-box protein 1. | COP9 signalosome complex subunit 5. | 0.968 |
PTRG_01670 | PTRG_00971 | B2VWV8 | B2VU47 | WLM domain-containing protein. | RING-box protein 1. | 0.726 |
PTRG_01670 | PTRG_01791 | B2VWV8 | B2VSN5 | WLM domain-containing protein. | PCI domain-containing protein. | 0.800 |
PTRG_01670 | PTRG_04571 | B2VWV8 | B2W4M1 | WLM domain-containing protein. | NUP50 domain-containing protein. | 0.821 |
PTRG_01670 | PTRG_04619 | B2VWV8 | B2W4R9 | WLM domain-containing protein. | Set1 complex component swd1. | 0.734 |
PTRG_01670 | PTRG_05501 | B2VWV8 | B2W6R3 | WLM domain-containing protein. | Cullin-4B; Belongs to the cullin family. | 0.881 |
PTRG_01670 | PTRG_07081 | B2VWV8 | B2WBR8 | WLM domain-containing protein. | COP9 signalosome subunit 1. | 0.723 |
PTRG_01670 | PTRG_07106 | B2VWV8 | B2WBU3 | WLM domain-containing protein. | COP9 signalosome complex subunit 2. | 0.794 |
PTRG_01670 | PTRG_07574 | B2VWV8 | B2WC65 | WLM domain-containing protein. | COP9 signalosome complex subunit 4. | 0.725 |
PTRG_01670 | PTRG_08974 | B2VWV8 | B2WGB8 | WLM domain-containing protein. | DNA damage-binding protein 1. | 0.928 |
PTRG_01670 | PTRG_09772 | B2VWV8 | B2WIG3 | WLM domain-containing protein. | COP9 signalosome complex subunit 5. | 0.725 |
PTRG_01791 | PTRG_00971 | B2VSN5 | B2VU47 | PCI domain-containing protein. | RING-box protein 1. | 0.946 |
PTRG_01791 | PTRG_01670 | B2VSN5 | B2VWV8 | PCI domain-containing protein. | WLM domain-containing protein. | 0.800 |
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