STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_03096Csm1 domain-containing protein. (531 aa)    
Predicted Functional Partners:
PTRG_05449
Kinetochore protein Mis13.
    
 
 0.930
PTRG_10912
ULP_PROTEASE domain-containing protein.
    
 
 0.922
PTRG_09925
Tyrosine-protein phosphatase CDC14.
    
 
 0.668
PTRG_07154
Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily.
    
 
 0.582
PTRG_07820
Uncharacterized protein.
   
 
 0.500
PTRG_09711
3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.487
PTRG_05014
Uncharacterized protein.
   
 
 0.483
PTRG_08801
Uncharacterized protein.
    
 
 0.482
PTRG_11619
Uncharacterized protein.
  
 
 0.480
PTRG_06288
Calpain-like protease palB/rim-13; Belongs to the peptidase C2 family.
    
 
 0.476
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
Server load: low (14%) [HD]