Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_03096 | PTRG_05014 | B2VX50 | B2W3G4 | Csm1 domain-containing protein. | Uncharacterized protein. | 0.483 |
PTRG_03096 | PTRG_05449 | B2VX50 | B2W6L1 | Csm1 domain-containing protein. | Kinetochore protein Mis13. | 0.930 |
PTRG_03096 | PTRG_06288 | B2VX50 | B2W8I0 | Csm1 domain-containing protein. | Calpain-like protease palB/rim-13; Belongs to the peptidase C2 family. | 0.476 |
PTRG_03096 | PTRG_07154 | B2VX50 | B2WBZ1 | Csm1 domain-containing protein. | Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily. | 0.582 |
PTRG_03096 | PTRG_07820 | B2VX50 | B2WCW1 | Csm1 domain-containing protein. | Uncharacterized protein. | 0.500 |
PTRG_03096 | PTRG_08801 | B2VX50 | B2WFU5 | Csm1 domain-containing protein. | Uncharacterized protein. | 0.482 |
PTRG_03096 | PTRG_09711 | B2VX50 | B2WIA2 | Csm1 domain-containing protein. | 3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.487 |
PTRG_03096 | PTRG_09925 | B2VX50 | B2WIW6 | Csm1 domain-containing protein. | Tyrosine-protein phosphatase CDC14. | 0.668 |
PTRG_03096 | PTRG_10912 | B2VX50 | B2WLQ2 | Csm1 domain-containing protein. | ULP_PROTEASE domain-containing protein. | 0.922 |
PTRG_03096 | PTRG_11619 | B2VX50 | B2WNQ9 | Csm1 domain-containing protein. | Uncharacterized protein. | 0.480 |
PTRG_05014 | PTRG_03096 | B2W3G4 | B2VX50 | Uncharacterized protein. | Csm1 domain-containing protein. | 0.483 |
PTRG_05014 | PTRG_05449 | B2W3G4 | B2W6L1 | Uncharacterized protein. | Kinetochore protein Mis13. | 0.946 |
PTRG_05014 | PTRG_08801 | B2W3G4 | B2WFU5 | Uncharacterized protein. | Uncharacterized protein. | 0.989 |
PTRG_05014 | PTRG_11619 | B2W3G4 | B2WNQ9 | Uncharacterized protein. | Uncharacterized protein. | 0.598 |
PTRG_05449 | PTRG_03096 | B2W6L1 | B2VX50 | Kinetochore protein Mis13. | Csm1 domain-containing protein. | 0.930 |
PTRG_05449 | PTRG_05014 | B2W6L1 | B2W3G4 | Kinetochore protein Mis13. | Uncharacterized protein. | 0.946 |
PTRG_05449 | PTRG_08801 | B2W6L1 | B2WFU5 | Kinetochore protein Mis13. | Uncharacterized protein. | 0.968 |
PTRG_05449 | PTRG_11619 | B2W6L1 | B2WNQ9 | Kinetochore protein Mis13. | Uncharacterized protein. | 0.952 |
PTRG_06288 | PTRG_03096 | B2W8I0 | B2VX50 | Calpain-like protease palB/rim-13; Belongs to the peptidase C2 family. | Csm1 domain-containing protein. | 0.476 |
PTRG_07154 | PTRG_03096 | B2WBZ1 | B2VX50 | Casein kinase I isoform epsilon; Belongs to the protein kinase superfamily. | Csm1 domain-containing protein. | 0.582 |
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