PTRG_03178 protein (Pyrenophora triticirepentis)

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

PTRG_03178

Poly(RC)-binding protein 4. (434 aa)

Predicted Functional Partners:

PTRG_07976

0.771

PTRG_07268

0.762

PTRG_00402

0.755

PTRG_01243

0.750

PTRG_02893

0.707

PTRG_11856

0.686

PTRG_10318

0.684

PTRG_08480

0.683

PTRG_09313

0.671

PTRG_08013

0.668

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00402	PTRG_01243	B2VR53	B2VVN1	Nuclear cap-binding protein subunit 2.	Cap binding protein.	0.999
PTRG_00402	PTRG_02893	B2VR53	B2VZQ3	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.730
PTRG_00402	PTRG_03178	B2VR53	B2VXD2	Nuclear cap-binding protein subunit 2.	Poly(RC)-binding protein 4.	0.755
PTRG_00402	PTRG_07268	B2VR53	B2WAF5	Nuclear cap-binding protein subunit 2.	Alternative splicing regulator.	0.753
PTRG_00402	PTRG_07976	B2VR53	B2WDB7	Nuclear cap-binding protein subunit 2.	RRM domain-containing protein.	0.750
PTRG_00402	PTRG_08013	B2VR53	B2WDF4	Nuclear cap-binding protein subunit 2.	RPOL4c domain-containing protein.	0.762
PTRG_00402	PTRG_08480	B2VR53	B2WEA7	Nuclear cap-binding protein subunit 2.	DNA-directed RNA polymerases N/8 kDa subunit superfamily.	0.771
PTRG_00402	PTRG_09313	B2VR53	B2WH54	Nuclear cap-binding protein subunit 2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.745
PTRG_00402	PTRG_10318	B2VR53	B2WJH2	Nuclear cap-binding protein subunit 2.	Pre-mRNA processing splicing factor 8.	0.910
PTRG_00402	PTRG_11856	B2VR53	B2WPE6	Nuclear cap-binding protein subunit 2.	Uncharacterized protein.	0.969
PTRG_01243	PTRG_00402	B2VVN1	B2VR53	Cap binding protein.	Nuclear cap-binding protein subunit 2.	0.999
PTRG_01243	PTRG_02893	B2VVN1	B2VZQ3	Cap binding protein.	Uncharacterized protein.	0.684
PTRG_01243	PTRG_03178	B2VVN1	B2VXD2	Cap binding protein.	Poly(RC)-binding protein 4.	0.750
PTRG_01243	PTRG_07268	B2VVN1	B2WAF5	Cap binding protein.	Alternative splicing regulator.	0.739
PTRG_01243	PTRG_07976	B2VVN1	B2WDB7	Cap binding protein.	RRM domain-containing protein.	0.758
PTRG_01243	PTRG_09313	B2VVN1	B2WH54	Cap binding protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.734
PTRG_01243	PTRG_10318	B2VVN1	B2WJH2	Cap binding protein.	Pre-mRNA processing splicing factor 8.	0.918
PTRG_01243	PTRG_11856	B2VVN1	B2WPE6	Cap binding protein.	Uncharacterized protein.	0.940
PTRG_02893	PTRG_00402	B2VZQ3	B2VR53	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.730
PTRG_02893	PTRG_01243	B2VZQ3	B2VVN1	Uncharacterized protein.	Cap binding protein.	0.684