STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_02581Thioredoxin. (192 aa)    
Predicted Functional Partners:
PTRG_10619
26S proteasome regulatory subunit RPN11.
   
 
 0.782
PTRG_07381
37S ribosomal protein Rsm22.
 
      0.709
PTRG_08791
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
  0.645
PTRG_09772
COP9 signalosome complex subunit 5.
   
 
 0.623
PTRG_10268
Uncharacterized protein.
     
 0.583
PTRG_07374
Cell division control protein 42.
    
  0.529
PTRG_09416
Cell division control protein 42.
    
  0.529
PTRG_02777
T-complex protein 1 subunit beta.
   
  0.524
PTRG_07012
26S proteasome non-ATPase regulatory subunit 12.
   
 
 0.516
PTRG_02716
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
   
   0.506
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.