STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_027063-oxoacyl-(Acyl-carrier-protein) reductase 4; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (262 aa)    
Predicted Functional Partners:
PTRG_04077
Malonyl-CoA-acyl carrier protein transacylase.
  
 0.614
PTRG_09711
3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.608
PTRG_11299
Peroxisomal multifunctional enzyme type 2.
   
 
0.553
PTRG_08114
Peroxisomal targeting signal receptor.
   
  0.545
PTRG_05916
Ubiquitin-conjugating enzyme E2 4.
   
  0.538
PTRG_08307
Peroxisomal membrane anchor protein (Pex14).
    
  0.522
PTRG_01980
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.519
PTRG_12091
Peroxisome assembly protein 12.
    
  0.509
PTRG_00815
3-oxoacyl-(Acyl carrier protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
0.505
PTRG_00907
CIA30 family protein.
    
  0.488
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.