Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00907 | PTRG_02845 | B2VTR2 | B2VZK5 | CIA30 family protein. | NEDD8-specific protease 2. | 0.737 |
PTRG_00907 | PTRG_03365 | B2VTR2 | B2VXW9 | CIA30 family protein. | Aconitate hydratase, mitochondrial. | 0.463 |
PTRG_00907 | PTRG_03725 | B2VTR2 | B2W2S7 | CIA30 family protein. | Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. | 0.463 |
PTRG_00907 | PTRG_04404 | B2VTR2 | B2W1R9 | CIA30 family protein. | Aconitate hydratase, mitochondrial. | 0.463 |
PTRG_00907 | PTRG_07573 | B2VTR2 | B2WC64 | CIA30 family protein. | 54S ribosomal protein L49, mitochondrial. | 0.463 |
PTRG_00907 | PTRG_07963 | B2VTR2 | B2WDA4 | CIA30 family protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.733 |
PTRG_00907 | PTRG_08825 | B2VTR2 | B2WFW9 | CIA30 family protein. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. | 0.584 |
PTRG_00907 | PTRG_11523 | B2VTR2 | B2WN74 | CIA30 family protein. | Neural cell expressed. | 0.908 |
PTRG_00938 | PTRG_02845 | B2VU14 | B2VZK5 | BZIP domain-containing protein. | NEDD8-specific protease 2. | 0.737 |
PTRG_00938 | PTRG_03365 | B2VU14 | B2VXW9 | BZIP domain-containing protein. | Aconitate hydratase, mitochondrial. | 0.463 |
PTRG_00938 | PTRG_03725 | B2VU14 | B2W2S7 | BZIP domain-containing protein. | Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. | 0.463 |
PTRG_00938 | PTRG_04404 | B2VU14 | B2W1R9 | BZIP domain-containing protein. | Aconitate hydratase, mitochondrial. | 0.463 |
PTRG_00938 | PTRG_07573 | B2VU14 | B2WC64 | BZIP domain-containing protein. | 54S ribosomal protein L49, mitochondrial. | 0.463 |
PTRG_00938 | PTRG_07963 | B2VU14 | B2WDA4 | BZIP domain-containing protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.733 |
PTRG_00938 | PTRG_08825 | B2VU14 | B2WFW9 | BZIP domain-containing protein. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. | 0.584 |
PTRG_00938 | PTRG_11523 | B2VU14 | B2WN74 | BZIP domain-containing protein. | Neural cell expressed. | 0.908 |
PTRG_02845 | PTRG_00907 | B2VZK5 | B2VTR2 | NEDD8-specific protease 2. | CIA30 family protein. | 0.737 |
PTRG_02845 | PTRG_00938 | B2VZK5 | B2VU14 | NEDD8-specific protease 2. | BZIP domain-containing protein. | 0.737 |
PTRG_02845 | PTRG_03365 | B2VZK5 | B2VXW9 | NEDD8-specific protease 2. | Aconitate hydratase, mitochondrial. | 0.884 |
PTRG_02845 | PTRG_03725 | B2VZK5 | B2W2S7 | NEDD8-specific protease 2. | Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. | 0.884 |
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