Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_02909 | PTRG_03498 | B2VZR9 | B2W250 | Uncharacterized protein. | GTP-binding protein yptV1. | 0.776 |
PTRG_02909 | PTRG_03607 | B2VZR9 | B2W2F9 | Uncharacterized protein. | GTP-binding protein ypt4. | 0.749 |
PTRG_02909 | PTRG_03728 | B2VZR9 | B2W2T0 | Uncharacterized protein. | GTP-binding protein ypt1. | 0.831 |
PTRG_02909 | PTRG_04384 | B2VZR9 | B2W1P9 | Uncharacterized protein. | Uncharacterized protein. | 0.937 |
PTRG_02909 | PTRG_05579 | B2VZR9 | B2W6Z1 | Uncharacterized protein. | Geranylgeranyl transferase type 2 subunit alpha. | 0.971 |
PTRG_02909 | PTRG_05724 | B2VZR9 | B2W7D6 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. | 0.700 |
PTRG_02909 | PTRG_05776 | B2VZR9 | B2W7I8 | Uncharacterized protein. | GTP-binding protein yptV5. | 0.777 |
PTRG_02909 | PTRG_08157 | B2VZR9 | B2WEZ6 | Uncharacterized protein. | Uncharacterized protein. | 0.772 |
PTRG_02909 | PTRG_08158 | B2VZR9 | B2WEZ7 | Uncharacterized protein. | GTP-binding protein SAS1. | 0.772 |
PTRG_02909 | PTRG_08235 | B2VZR9 | B2WF74 | Uncharacterized protein. | Synaptobrevin; Belongs to the synaptobrevin family. | 0.794 |
PTRG_03498 | PTRG_02909 | B2W250 | B2VZR9 | GTP-binding protein yptV1. | Uncharacterized protein. | 0.776 |
PTRG_03498 | PTRG_03607 | B2W250 | B2W2F9 | GTP-binding protein yptV1. | GTP-binding protein ypt4. | 0.675 |
PTRG_03498 | PTRG_03728 | B2W250 | B2W2T0 | GTP-binding protein yptV1. | GTP-binding protein ypt1. | 0.941 |
PTRG_03498 | PTRG_04384 | B2W250 | B2W1P9 | GTP-binding protein yptV1. | Uncharacterized protein. | 0.679 |
PTRG_03498 | PTRG_05579 | B2W250 | B2W6Z1 | GTP-binding protein yptV1. | Geranylgeranyl transferase type 2 subunit alpha. | 0.738 |
PTRG_03498 | PTRG_05724 | B2W250 | B2W7D6 | GTP-binding protein yptV1. | Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family. | 0.937 |
PTRG_03498 | PTRG_05776 | B2W250 | B2W7I8 | GTP-binding protein yptV1. | GTP-binding protein yptV5. | 0.728 |
PTRG_03498 | PTRG_08157 | B2W250 | B2WEZ6 | GTP-binding protein yptV1. | Uncharacterized protein. | 0.795 |
PTRG_03498 | PTRG_08158 | B2W250 | B2WEZ7 | GTP-binding protein yptV1. | GTP-binding protein SAS1. | 0.783 |
PTRG_03498 | PTRG_08235 | B2W250 | B2WF74 | GTP-binding protein yptV1. | Synaptobrevin; Belongs to the synaptobrevin family. | 0.706 |
page 1 of 5