STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_03949Zinc-binding dehydrogenase family oxidoreductase. (364 aa)    
Predicted Functional Partners:
PTRG_06724
Sulfite oxidase, mitochondrial.
     
 0.714
PTRG_09563
Sulfite oxidase, mitochondrial.
     
 0.714
PTRG_04973
Nitrate reductase.
     
 0.590
PTRG_04544
Fatty acid-binding protein.
  
 0.504
PTRG_04385
Conidial yellow pigment biosynthesis polyketide synthase.
   
 0.479
PTRG_11838
Fatty acid synthase.
   
 0.479
PTRG_00110
Phenolpthiocerol synthesis polyketide synthase ppsA.
    
 0.453
PTRG_00044
Fatty acid synthase.
    
 0.453
PTRG_03323
Conidial yellow pigment biosynthesis polyketide synthase.
    
 0.453
PTRG_02708
Conidial yellow pigment biosynthesis polyketide synthase.
    
 0.453
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.