STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04144Mycocerosic acid synthase. (2551 aa)    
Predicted Functional Partners:
PTRG_06138
Thioesterase family protein.
   
 0.568
PTRG_04077
Malonyl-CoA-acyl carrier protein transacylase.
  
0.544
PTRG_10128
Tyrocidine synthetase 1.
  
 0.533
PTRG_04544
Fatty acid-binding protein.
    
 0.504
PTRG_04385
Conidial yellow pigment biosynthesis polyketide synthase.
  
 
0.476
PTRG_11838
Fatty acid synthase.
  
 
0.469
PTRG_00894
Uncharacterized protein.
  
 
 0.467
PTRG_05961
Uncharacterized protein.
  
 
 0.467
PTRG_08567
XPG_I_2 domain-containing protein.
  
 
 0.467
PTRG_01915
Acetyl-CoA carboxylase.
   
 
 0.464
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.