STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04147Cytochrome P-450; Belongs to the cytochrome P450 family. (495 aa)    
Predicted Functional Partners:
PTRG_04973
Nitrate reductase.
    
 0.784
PTRG_12145
Cytochrome P450.
  
     0.504
PTRG_04385
Conidial yellow pigment biosynthesis polyketide synthase.
  
 0.486
PTRG_11838
Fatty acid synthase.
  
 0.486
PTRG_01753
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.477
PTRG_10135
Cytochrome P450 family member; Belongs to the cytochrome P450 family.
  
 
   0.477
PTRG_10136
Cytochrome P450; Belongs to the cytochrome P450 family.
  
 
 0.477
PTRG_10957
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
    
 0.473
PTRG_02816
3'-5' exonuclease domain-containing protein.
    
  0.471
PTRG_03054
HRDC domain-containing protein.
    
  0.471
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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