Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00850 | PTRG_01763 | B2VTK5 | B2VSK7 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoyl dehydrogenase. | 0.996 |
PTRG_00850 | PTRG_03281 | B2VTK5 | B2VXN5 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Dihydrolipoamide succinyltransferase. | 0.760 |
PTRG_00850 | PTRG_04163 | B2VTK5 | B2W128 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Peroxidase; Belongs to the peroxidase family. | 0.503 |
PTRG_00850 | PTRG_04168 | B2VTK5 | B2W133 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.953 |
PTRG_00850 | PTRG_04936 | B2VTK5 | B2W5N6 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.762 |
PTRG_00850 | PTRG_06542 | B2VTK5 | B2W984 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial. | 0.994 |
PTRG_00850 | PTRG_07280 | B2VTK5 | B2WAG7 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Pyruvate dehydrogenase protein x component. | 0.748 |
PTRG_00850 | PTRG_08577 | B2VTK5 | B2WEK4 | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.969 |
PTRG_01763 | PTRG_00850 | B2VSK7 | B2VTK5 | Dihydrolipoyl dehydrogenase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.996 |
PTRG_01763 | PTRG_03281 | B2VSK7 | B2VXN5 | Dihydrolipoyl dehydrogenase. | Dihydrolipoamide succinyltransferase. | 0.999 |
PTRG_01763 | PTRG_04163 | B2VSK7 | B2W128 | Dihydrolipoyl dehydrogenase. | Peroxidase; Belongs to the peroxidase family. | 0.502 |
PTRG_01763 | PTRG_04936 | B2VSK7 | B2W5N6 | Dihydrolipoyl dehydrogenase. | Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.999 |
PTRG_01763 | PTRG_05614 | B2VSK7 | B2W726 | Dihydrolipoyl dehydrogenase. | Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.518 |
PTRG_01763 | PTRG_06542 | B2VSK7 | B2W984 | Dihydrolipoyl dehydrogenase. | 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial. | 0.986 |
PTRG_01763 | PTRG_07280 | B2VSK7 | B2WAG7 | Dihydrolipoyl dehydrogenase. | Pyruvate dehydrogenase protein x component. | 0.997 |
PTRG_01763 | PTRG_08577 | B2VSK7 | B2WEK4 | Dihydrolipoyl dehydrogenase. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.998 |
PTRG_03281 | PTRG_00850 | B2VXN5 | B2VTK5 | Dihydrolipoamide succinyltransferase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.760 |
PTRG_03281 | PTRG_01763 | B2VXN5 | B2VSK7 | Dihydrolipoamide succinyltransferase. | Dihydrolipoyl dehydrogenase. | 0.999 |
PTRG_03281 | PTRG_04163 | B2VXN5 | B2W128 | Dihydrolipoamide succinyltransferase. | Peroxidase; Belongs to the peroxidase family. | 0.503 |
PTRG_03281 | PTRG_04168 | B2VXN5 | B2W133 | Dihydrolipoamide succinyltransferase. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.943 |
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