Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00414 | PTRG_01020 | B2VQW5 | B2VUG4 | Serine/threonine-protein phosphatase. | Ankyrin repeat domain containing protein. | 0.686 |
PTRG_00414 | PTRG_01082 | B2VQW5 | B2VUU5 | Serine/threonine-protein phosphatase. | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | 0.539 |
PTRG_00414 | PTRG_03465 | B2VQW5 | B2W217 | Serine/threonine-protein phosphatase. | Ankryin repeat S-palmitoyl transferase. | 0.572 |
PTRG_00414 | PTRG_04216 | B2VQW5 | B2W181 | Serine/threonine-protein phosphatase. | Ankyrin repeat protein nuc-2. | 0.983 |
PTRG_00414 | PTRG_11412 | B2VQW5 | B2WNF5 | Serine/threonine-protein phosphatase. | Glycerophosphodiester phosphodiesterase GDE1. | 0.716 |
PTRG_01020 | PTRG_00414 | B2VUG4 | B2VQW5 | Ankyrin repeat domain containing protein. | Serine/threonine-protein phosphatase. | 0.686 |
PTRG_01020 | PTRG_01082 | B2VUG4 | B2VUU5 | Ankyrin repeat domain containing protein. | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | 0.843 |
PTRG_01020 | PTRG_03465 | B2VUG4 | B2W217 | Ankyrin repeat domain containing protein. | Ankryin repeat S-palmitoyl transferase. | 0.640 |
PTRG_01020 | PTRG_03829 | B2VUG4 | B2W331 | Ankyrin repeat domain containing protein. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.617 |
PTRG_01020 | PTRG_04216 | B2VUG4 | B2W181 | Ankyrin repeat domain containing protein. | Ankyrin repeat protein nuc-2. | 0.861 |
PTRG_01020 | PTRG_05033 | B2VUG4 | B2W3I3 | Ankyrin repeat domain containing protein. | Uncharacterized protein. | 0.623 |
PTRG_01020 | PTRG_05107 | B2VUG4 | B2W3Q7 | Ankyrin repeat domain containing protein. | Rho-type GTPase-activating protein 2. | 0.991 |
PTRG_01020 | PTRG_05368 | B2VUG4 | B2W6D0 | Ankyrin repeat domain containing protein. | Protein kinase domain-containing protein. | 0.992 |
PTRG_01020 | PTRG_11412 | B2VUG4 | B2WNF5 | Ankyrin repeat domain containing protein. | Glycerophosphodiester phosphodiesterase GDE1. | 0.902 |
PTRG_01082 | PTRG_00414 | B2VUU5 | B2VQW5 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Serine/threonine-protein phosphatase. | 0.539 |
PTRG_01082 | PTRG_01020 | B2VUU5 | B2VUG4 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Ankyrin repeat domain containing protein. | 0.843 |
PTRG_01082 | PTRG_03465 | B2VUU5 | B2W217 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Ankryin repeat S-palmitoyl transferase. | 0.558 |
PTRG_01082 | PTRG_03829 | B2VUU5 | B2W331 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.664 |
PTRG_01082 | PTRG_04216 | B2VUU5 | B2W181 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Ankyrin repeat protein nuc-2. | 0.558 |
PTRG_01082 | PTRG_05368 | B2VUU5 | B2W6D0 | S-phase kinase-associated protein 1A; Belongs to the SKP1 family. | Protein kinase domain-containing protein. | 0.705 |
page 1 of 5