STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05025Elongation factor 3. (1064 aa)    
Predicted Functional Partners:
PTRG_05592
Elongation factor 3.
  
 
0.997
PTRG_09868
60S ribosomal protein L5-B.
   
 
 0.996
PTRG_10394
Elongation factor 1-gamma 1.
   
 
 0.996
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.995
PTRG_07858
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.995
PTRG_02287
U3 small nucleolar ribonucleoprotein protein IMP3.
  
 
 0.994
rps0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.994
PTRG_04928
S4 RNA-binding domain-containing protein.
  
 
 0.994
PTRG_07228
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.994
PTRG_07111
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.994
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.