STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05152Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
PTRG_10865
Histone acetyltransferase type B subunit 2.
    
 
 0.833
PTRG_02266
ISWI chromatin-remodeling complex ATPase ISW2.
    
 
 0.650
PTRG_05212
ISWI chromatin-remodeling complex ATPase ISW2.
    
 
 0.650
PTRG_09110
ISWI chromatin-remodeling complex ATPase ISW2.
    
 
 0.650
PTRG_01123
Uncharacterized protein.
   
 
 0.556
PTRG_06531
TFIIS central domain-containing protein.
   
    0.551
PTRG_08814
Sister chromatid cohesion protein.
   
    0.551
PTRG_08863
Uncharacterized protein.
   
    0.551
PTRG_03952
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
   0.483
PTRG_08347
SET domain-containing protein.
   
   0.483
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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