Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01123 | PTRG_05152 | B2VUY6 | B2W3V2 | Uncharacterized protein. | Uncharacterized protein. | 0.556 |
PTRG_01123 | PTRG_06531 | B2VUY6 | B2W973 | Uncharacterized protein. | TFIIS central domain-containing protein. | 0.401 |
PTRG_01123 | PTRG_08814 | B2VUY6 | B2WFV8 | Uncharacterized protein. | Sister chromatid cohesion protein. | 0.481 |
PTRG_01123 | PTRG_08863 | B2VUY6 | B2WG07 | Uncharacterized protein. | Uncharacterized protein. | 0.481 |
PTRG_01123 | PTRG_10865 | B2VUY6 | B2WLK5 | Uncharacterized protein. | Histone acetyltransferase type B subunit 2. | 0.585 |
PTRG_02266 | PTRG_05152 | B2VVF1 | B2W3V2 | ISWI chromatin-remodeling complex ATPase ISW2. | Uncharacterized protein. | 0.650 |
PTRG_02266 | PTRG_08814 | B2VVF1 | B2WFV8 | ISWI chromatin-remodeling complex ATPase ISW2. | Sister chromatid cohesion protein. | 0.464 |
PTRG_02266 | PTRG_10865 | B2VVF1 | B2WLK5 | ISWI chromatin-remodeling complex ATPase ISW2. | Histone acetyltransferase type B subunit 2. | 0.930 |
PTRG_03952 | PTRG_05152 | B2W0G7 | B2W3V2 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | Uncharacterized protein. | 0.483 |
PTRG_03952 | PTRG_06531 | B2W0G7 | B2W973 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | TFIIS central domain-containing protein. | 0.753 |
PTRG_03952 | PTRG_08814 | B2W0G7 | B2WFV8 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | Sister chromatid cohesion protein. | 0.740 |
PTRG_03952 | PTRG_08863 | B2W0G7 | B2WG07 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | Uncharacterized protein. | 0.473 |
PTRG_03952 | PTRG_10865 | B2W0G7 | B2WLK5 | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | Histone acetyltransferase type B subunit 2. | 0.617 |
PTRG_05152 | PTRG_01123 | B2W3V2 | B2VUY6 | Uncharacterized protein. | Uncharacterized protein. | 0.556 |
PTRG_05152 | PTRG_02266 | B2W3V2 | B2VVF1 | Uncharacterized protein. | ISWI chromatin-remodeling complex ATPase ISW2. | 0.650 |
PTRG_05152 | PTRG_03952 | B2W3V2 | B2W0G7 | Uncharacterized protein. | Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. | 0.483 |
PTRG_05152 | PTRG_05212 | B2W3V2 | B2W412 | Uncharacterized protein. | ISWI chromatin-remodeling complex ATPase ISW2. | 0.650 |
PTRG_05152 | PTRG_06531 | B2W3V2 | B2W973 | Uncharacterized protein. | TFIIS central domain-containing protein. | 0.551 |
PTRG_05152 | PTRG_08347 | B2W3V2 | B2WDX4 | Uncharacterized protein. | SET domain-containing protein. | 0.483 |
PTRG_05152 | PTRG_08814 | B2W3V2 | B2WFV8 | Uncharacterized protein. | Sister chromatid cohesion protein. | 0.551 |
page 1 of 3