STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04533Acetamidase. (535 aa)    
Predicted Functional Partners:
PTRG_02270
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
 
 0.831
PTRG_10561
CN hydrolase domain-containing protein.
    
  0.742
PTRG_01549
Nitrilase.
    
  0.721
PTRG_07238
Aspartyl-tRNA synthetase.
  
 0.632
PTRG_02916
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.545
PTRG_07120
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.545
PTRG_00933
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.540
PTRG_10281
Aldehyde dehydrogenase X, mitochondrial; Belongs to the aldehyde dehydrogenase family.
   
 
  0.540
PTRG_11878
Nitrilase.
    
  0.532
PTRG_01026
Uncharacterized protein.
  
 0.501
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.