STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04650Uncharacterized protein. (636 aa)    
Predicted Functional Partners:
PTRG_05651
Synaptobrevin.
     
 0.593
PTRG_00048
Protein phosphatase PP2A regulatory subunit A.
   
 0.567
PTRG_00241
GTP-binding protein 128up.
    
   0.557
PTRG_07434
Syntaxin.
    
   0.537
PTRG_11327
Uncharacterized protein.
    
   0.537
PTRG_11490
DNA polymerase epsilon subunit B.
    
   0.537
PTRG_02251
Vesicle-fusing ATPase.
    
  0.503
PTRG_05776
GTP-binding protein yptV5.
    
  0.486
mdm34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. Mdm34 is required for the interaction of the ER-resident membrane protein mmm1 and the outer mitochondrial membrane-resident beta-barrel protein mdm10.
    
   0.474
PTRG_07616
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
   0.474
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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