Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00048 | PTRG_04650 | B2VRI8 | B2W4V0 | Protein phosphatase PP2A regulatory subunit A. | Uncharacterized protein. | 0.567 |
PTRG_00241 | PTRG_04650 | B2VX04 | B2W4V0 | GTP-binding protein 128up. | Uncharacterized protein. | 0.557 |
PTRG_00241 | PTRG_07434 | B2VX04 | B2WAX1 | GTP-binding protein 128up. | Syntaxin. | 0.836 |
PTRG_00241 | PTRG_07616 | B2VX04 | B2WCA7 | GTP-binding protein 128up. | Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. | 0.695 |
PTRG_00241 | PTRG_11327 | B2VX04 | B2WMW7 | GTP-binding protein 128up. | Uncharacterized protein. | 0.836 |
PTRG_00241 | PTRG_11490 | B2VX04 | B2WN41 | GTP-binding protein 128up. | DNA polymerase epsilon subunit B. | 0.836 |
PTRG_00241 | mdm34 | B2VX04 | B2VS19 | GTP-binding protein 128up. | Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. Mdm34 is required for the interaction of the ER-resident membrane protein mmm1 and the outer mitochondrial membrane-resident beta-barrel protein mdm10. | 0.695 |
PTRG_02251 | PTRG_04650 | B2VVD6 | B2W4V0 | Vesicle-fusing ATPase. | Uncharacterized protein. | 0.503 |
PTRG_02251 | PTRG_05651 | B2VVD6 | B2W763 | Vesicle-fusing ATPase. | Synaptobrevin. | 0.962 |
PTRG_02251 | PTRG_05776 | B2VVD6 | B2W7I8 | Vesicle-fusing ATPase. | GTP-binding protein yptV5. | 0.796 |
PTRG_02251 | PTRG_07434 | B2VVD6 | B2WAX1 | Vesicle-fusing ATPase. | Syntaxin. | 0.977 |
PTRG_04650 | PTRG_00048 | B2W4V0 | B2VRI8 | Uncharacterized protein. | Protein phosphatase PP2A regulatory subunit A. | 0.567 |
PTRG_04650 | PTRG_00241 | B2W4V0 | B2VX04 | Uncharacterized protein. | GTP-binding protein 128up. | 0.557 |
PTRG_04650 | PTRG_02251 | B2W4V0 | B2VVD6 | Uncharacterized protein. | Vesicle-fusing ATPase. | 0.503 |
PTRG_04650 | PTRG_05651 | B2W4V0 | B2W763 | Uncharacterized protein. | Synaptobrevin. | 0.593 |
PTRG_04650 | PTRG_05776 | B2W4V0 | B2W7I8 | Uncharacterized protein. | GTP-binding protein yptV5. | 0.486 |
PTRG_04650 | PTRG_07434 | B2W4V0 | B2WAX1 | Uncharacterized protein. | Syntaxin. | 0.537 |
PTRG_04650 | PTRG_07616 | B2W4V0 | B2WCA7 | Uncharacterized protein. | Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. | 0.474 |
PTRG_04650 | PTRG_11327 | B2W4V0 | B2WMW7 | Uncharacterized protein. | Uncharacterized protein. | 0.537 |
PTRG_04650 | PTRG_11490 | B2W4V0 | B2WN41 | Uncharacterized protein. | DNA polymerase epsilon subunit B. | 0.537 |
page 1 of 3