Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00659 | PTRG_01734 | B2VSF5 | B2VSA8 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | Glutamine synthetase. | 0.811 |
PTRG_00659 | PTRG_04082 | B2VSF5 | B2W0U7 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.845 |
PTRG_00659 | PTRG_04667 | B2VSF5 | B2W4W7 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | Rubredoxin-NAD(+) reductase. | 0.830 |
PTRG_00659 | PTRG_05410 | B2VSF5 | B2W6H2 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.811 |
PTRG_00659 | PTRG_06314 | B2VSF5 | B2W8K6 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | Extracellular developmental signal biosynthesis protein FluG; Belongs to the glutamine synthetase family. | 0.811 |
PTRG_00659 | PTRG_11478 | B2VSF5 | B2WN29 | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.845 |
PTRG_01734 | PTRG_00659 | B2VSA8 | B2VSF5 | Glutamine synthetase. | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | 0.811 |
PTRG_01734 | PTRG_04082 | B2VSA8 | B2W0U7 | Glutamine synthetase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.898 |
PTRG_01734 | PTRG_04667 | B2VSA8 | B2W4W7 | Glutamine synthetase. | Rubredoxin-NAD(+) reductase. | 0.847 |
PTRG_01734 | PTRG_04973 | B2VSA8 | B2W3C3 | Glutamine synthetase. | Nitrate reductase. | 0.660 |
PTRG_01734 | PTRG_05410 | B2VSA8 | B2W6H2 | Glutamine synthetase. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.884 |
PTRG_01734 | PTRG_06314 | B2VSA8 | B2W8K6 | Glutamine synthetase. | Extracellular developmental signal biosynthesis protein FluG; Belongs to the glutamine synthetase family. | 0.797 |
PTRG_01734 | PTRG_07436 | B2VSA8 | B2WAX3 | Glutamine synthetase. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.478 |
PTRG_01734 | PTRG_11478 | B2VSA8 | B2WN29 | Glutamine synthetase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.891 |
PTRG_04082 | PTRG_00659 | B2W0U7 | B2VSF5 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Cyanide hydratase; Catalyzes the hydration of cyanide to formamide. Degradation of cyanide may be important for plant pathogenic fungi in infection of cyanogenic plants; Belongs to the carbon-nitrogen hydrolase superfamily. Nitrilase family. | 0.845 |
PTRG_04082 | PTRG_01734 | B2W0U7 | B2VSA8 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.898 |
PTRG_04082 | PTRG_04667 | B2W0U7 | B2W4W7 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Rubredoxin-NAD(+) reductase. | 0.826 |
PTRG_04082 | PTRG_04973 | B2W0U7 | B2W3C3 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Nitrate reductase. | 0.639 |
PTRG_04082 | PTRG_05410 | B2W0U7 | B2W6H2 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.885 |
PTRG_04082 | PTRG_06314 | B2W0U7 | B2W8K6 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Extracellular developmental signal biosynthesis protein FluG; Belongs to the glutamine synthetase family. | 0.836 |
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