STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_04828Sulfate permease 2. (792 aa)    
Predicted Functional Partners:
PTRG_11399
Sulfate transporter family protein.
    
 
 0.643
PTRG_03728
GTP-binding protein ypt1.
   
   0.628
PTRG_02728
C6 zinc finger domain containing protein.
  
 
 0.587
PTRG_00585
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
   0.552
PTRG_07306
Uncharacterized protein.
    
   0.527
PTRG_07307
Uncharacterized protein; Belongs to the complex I LYR family.
    
   0.527
PTRG_01753
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.495
PTRG_02221
TYR_PHOSPHATASE_2 domain-containing protein.
    
   0.478
PTRG_04121
Tyrosine-protein phosphatase SIW14.
    
   0.478
PTRG_01488
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.445
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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