STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_06164Nitrogen regulatory protein areA. (912 aa)    
Predicted Functional Partners:
PTRG_05354
MADS box transcription factor Mcm1.
    
 0.911
PTRG_05920
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.895
PTRG_09555
Nitrogen metabolic regulation protein.
    
 
 0.786
PTRG_09556
Nitrogen metabolic regulation protein.
    
 
 0.786
PTRG_09160
GATA factor SREP.
     
0.736
PTRG_02418
TATA-box-binding protein.
    
 0.697
PTRG_05029
GATA type zinc finger protein Asd4.
  
 
0.694
PTRG_00426
Cross-pathway control protein 1.
    
 0.669
PTRG_01667
Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.668
PTRG_08173
Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.668
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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