STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05402Replication factor C subunit 5. (348 aa)    
Predicted Functional Partners:
PTRG_00645
Replication factor C subunit 3.
  
0.999
PTRG_03638
Replication factor C subunit 4.
   
0.999
PTRG_06010
Replication factor C subunit 1.
   
 0.999
PTRG_07862
Cell cycle checkpoint protein RAD17.
   
 0.999
PTRG_07869
Replication factor C subunit 4.
   
0.999
PTRG_08060
Vezatin domain-containing protein.
  
 0.999
PTRG_02031
Sister chromatid cohesion protein Eso1.
   
 0.991
PTRG_06424
Sister chromatid cohesion protein Eso1.
   
 0.991
PTRG_05882
AAA domain-containing protein.
   
 0.988
PTRG_02816
3'-5' exonuclease domain-containing protein.
   
 0.986
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.