STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05549SH3 domain-containing protein. (843 aa)    
Predicted Functional Partners:
PTRG_07403
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.940
PTRG_07357
Kelch domain-containing protein 3.
    
 
 0.935
PTRG_07121
Serine/threonine-protein phosphatase.
    
 
 0.815
PTRG_03418
Cytokinesis protein sepA.
    
 
 0.598
PTRG_01020
Ankyrin repeat domain containing protein.
   
 0.557
PTRG_07340
Beta-chimaerin.
    
   0.536
PTRG_04341
Actin-interacting protein (Bud6/Aip3).
    
 
 0.505
PTRG_09856
Dual specificity protein kinase pom1.
    
 
 0.503
PTRG_04002
Actin-3; Belongs to the actin family.
    
 
 0.487
PTRG_00751
Non-specific serine/threonine protein kinase.
    
 
 0.437
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.