STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05848Uncharacterized protein. (624 aa)    
Predicted Functional Partners:
PTRG_06487
Thyroid hormone receptor interactor 12.
   
  
 0.953
PTRG_00907
CIA30 family protein.
    
   0.645
PTRG_00938
BZIP domain-containing protein.
    
   0.645
PTRG_11488
Ubiquitin.
    
   0.645
PTRG_05778
Ribonucleoside-diphosphate reductase subunit M2.
     
 0.584
PTRG_09042
Mitotic checkpoint protein BUB3.
    
 
 0.575
PTRG_03274
AN1-type zinc finger protein.
    
   0.570
PTRG_03538
Integral membrane protein.
    
   0.570
PTRG_05080
Ubiquitin.
    
   0.570
PTRG_05081
RRN7-type domain-containing protein.
    
   0.570
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.