STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_05921Telo_bind domain-containing protein. (599 aa)    
Predicted Functional Partners:
PTRG_04617
Uncharacterized protein.
    
 
 0.861
PTRG_07413
Uncharacterized protein.
    
 
 0.861
PTRG_02816
3'-5' exonuclease domain-containing protein.
    
 0.849
PTRG_03054
HRDC domain-containing protein.
    
 0.849
PTRG_07347
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.730
PTRG_07369
MYB DNA-binding domain containing protein.
    
 0.730
PTRG_07828
Peptidase.
    
 0.730
PTRG_08228
Peptidase.
    
 0.730
PTRG_05512
H/ACA ribonucleoprotein complex subunit 2.
     
 0.711
PTRG_00909
Single-stranded DNA binding protein Ssb2.
   
 0.699
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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