Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00675 | PTRG_01558 | B2VSH1 | B2VWJ6 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Nucleoporin nup189. | 0.999 |
PTRG_00675 | PTRG_03229 | B2VSH1 | B2VXI3 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | ELYS domain-containing protein. | 0.981 |
PTRG_00675 | PTRG_03711 | B2VSH1 | B2W2R3 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Nucleoporin Nup44. | 0.983 |
PTRG_00675 | PTRG_04420 | B2VSH1 | B2W1T5 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Uncharacterized protein. | 0.999 |
PTRG_00675 | PTRG_04571 | B2VSH1 | B2W4M1 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | NUP50 domain-containing protein. | 0.999 |
PTRG_00675 | PTRG_05950 | B2VSH1 | B2W812 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Uncharacterized protein. | 0.984 |
PTRG_00675 | PTRG_08146 | B2VSH1 | B2WEY5 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Uncharacterized protein. | 0.985 |
PTRG_00675 | PTRG_08909 | B2VSH1 | B2WG53 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
PTRG_00675 | PTRG_11161 | B2VSH1 | B2WMF1 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Nucleoporin seh1; Belongs to the WD repeat SEC13 family. | 0.999 |
PTRG_00675 | PTRG_11339 | B2VSH1 | B2WMX9 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Nucleoporin Nup157/170. | 0.985 |
PTRG_01558 | PTRG_00675 | B2VWJ6 | B2VSH1 | Nucleoporin nup189. | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | 0.999 |
PTRG_01558 | PTRG_03229 | B2VWJ6 | B2VXI3 | Nucleoporin nup189. | ELYS domain-containing protein. | 0.920 |
PTRG_01558 | PTRG_03711 | B2VWJ6 | B2W2R3 | Nucleoporin nup189. | Nucleoporin Nup44. | 0.992 |
PTRG_01558 | PTRG_04420 | B2VWJ6 | B2W1T5 | Nucleoporin nup189. | Uncharacterized protein. | 0.999 |
PTRG_01558 | PTRG_04571 | B2VWJ6 | B2W4M1 | Nucleoporin nup189. | NUP50 domain-containing protein. | 0.787 |
PTRG_01558 | PTRG_05950 | B2VWJ6 | B2W812 | Nucleoporin nup189. | Uncharacterized protein. | 0.980 |
PTRG_01558 | PTRG_08146 | B2VWJ6 | B2WEY5 | Nucleoporin nup189. | Uncharacterized protein. | 0.997 |
PTRG_01558 | PTRG_08909 | B2VWJ6 | B2WG53 | Nucleoporin nup189. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
PTRG_01558 | PTRG_11161 | B2VWJ6 | B2WMF1 | Nucleoporin nup189. | Nucleoporin seh1; Belongs to the WD repeat SEC13 family. | 0.963 |
PTRG_01558 | PTRG_11339 | B2VWJ6 | B2WMX9 | Nucleoporin nup189. | Nucleoporin Nup157/170. | 0.998 |
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