STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_06257TBPIP domain-containing protein. (227 aa)    
Predicted Functional Partners:
PTRG_08720
Mnd1 domain-containing protein.
  
 0.997
PTRG_08721
Uncharacterized protein.
   
 0.972
PTRG_11408
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.651
PTRG_04810
DNA repair protein RAD51; Belongs to the RecA family.
   
 0.640
PTRG_09549
Meiosis-specific topoisomerase Spo11.
    
 
 0.549
PTRG_11184
RECA_2 domain-containing protein.
   
 0.476
PTRG_03000
DNA mismatch repair protein mutS.
   
  
 0.447
PTRG_09550
Uncharacterized protein.
    
 
 0.430
PTRG_03596
DNA repair protein rhp57.
   
 
 0.429
PTRG_01075
Meiosis-specific serine/threonine-protein kinase mek1.
    
 
 0.404
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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