Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00508 | PTRG_06262 | B2VQU8 | B2W8F4 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.999 |
PTRG_00508 | PTRG_06329 | B2VQU8 | B2W8M1 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | HUN domain-containing protein. | 0.957 |
PTRG_00508 | PTRG_08350 | B2VQU8 | B2WDX7 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Uncharacterized protein. | 0.572 |
PTRG_06235 | PTRG_06329 | B2W8C7 | B2W8M1 | CRAL-TRIO domain-containing protein. | HUN domain-containing protein. | 0.453 |
PTRG_06235 | PTRG_08463 | B2W8C7 | B2WE90 | CRAL-TRIO domain-containing protein. | CRAL/TRIO domain containing protein. | 0.502 |
PTRG_06262 | PTRG_00508 | B2W8F4 | B2VQU8 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.999 |
PTRG_06262 | PTRG_06329 | B2W8F4 | B2W8M1 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | HUN domain-containing protein. | 0.935 |
PTRG_06262 | PTRG_08350 | B2W8F4 | B2WDX7 | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | Uncharacterized protein. | 0.431 |
PTRG_06292 | PTRG_06329 | B2W8I4 | B2W8M1 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | HUN domain-containing protein. | 0.439 |
PTRG_06292 | PTRG_07544 | B2W8I4 | B2WC35 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Zn-dependent hydrolases. | 0.710 |
PTRG_06292 | PTRG_09492 | B2W8I4 | B2WHN3 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Adrenodoxin. | 0.710 |
PTRG_06292 | PTRG_09711 | B2W8I4 | B2WIA2 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 3-oxoacyl-(Acyl-carrier-protein) synthase, mitochondrial; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.447 |
PTRG_06329 | PTRG_00508 | B2W8M1 | B2VQU8 | HUN domain-containing protein. | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.957 |
PTRG_06329 | PTRG_06235 | B2W8M1 | B2W8C7 | HUN domain-containing protein. | CRAL-TRIO domain-containing protein. | 0.453 |
PTRG_06329 | PTRG_06262 | B2W8M1 | B2W8F4 | HUN domain-containing protein. | Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. | 0.935 |
PTRG_06329 | PTRG_06292 | B2W8M1 | B2W8I4 | HUN domain-containing protein. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.439 |
PTRG_06329 | PTRG_06340 | B2W8M1 | B2W8N2 | HUN domain-containing protein. | SEC14 cytosolic factor. | 0.453 |
PTRG_06329 | PTRG_07544 | B2W8M1 | B2WC35 | HUN domain-containing protein. | Zn-dependent hydrolases. | 0.457 |
PTRG_06329 | PTRG_08350 | B2W8M1 | B2WDX7 | HUN domain-containing protein. | Uncharacterized protein. | 0.523 |
PTRG_06329 | PTRG_08463 | B2W8M1 | B2WE90 | HUN domain-containing protein. | CRAL/TRIO domain containing protein. | 0.453 |
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