STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_0638460S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (111 aa)    
Predicted Functional Partners:
PTRG_00466
60S ribosomal protein L35.
   
 0.999
PTRG_00528
KOW domain-containing protein.
   
 0.999
PTRG_01864
60S ribosomal protein L30.
   
 0.999
PTRG_01865
60S ribosomal protein L10-B.
   
 0.999
PTRG_01892
60S ribosomal protein L27-B.
   
 0.999
PTRG_00975
Ribosomal_L28e domain-containing protein.
   
 0.999
PTRG_00987
60S ribosomal protein L25.
   
 0.999
PTRG_01101
60S ribosomal protein L39.
   
 0.999
PTRG_02254
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
PTRG_02267
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.999
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.