Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01763 | PTRG_03081 | B2VSK7 | B2W091 | Dihydrolipoyl dehydrogenase. | Aspartate aminotransferase. | 0.496 |
PTRG_01763 | PTRG_03987 | B2VSK7 | B2W0K2 | Dihydrolipoyl dehydrogenase. | Glutamate synthase. | 0.863 |
PTRG_01763 | PTRG_04082 | B2VSK7 | B2W0U7 | Dihydrolipoyl dehydrogenase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.890 |
PTRG_01763 | PTRG_04132 | B2VSK7 | B2W0Z7 | Dihydrolipoyl dehydrogenase. | Purine catabolism protein pucG. | 0.837 |
PTRG_01763 | PTRG_06083 | B2VSK7 | B2W5S5 | Dihydrolipoyl dehydrogenase. | Aspartate aminotransferase. | 0.475 |
PTRG_01763 | PTRG_06211 | B2VSK7 | B2W653 | Dihydrolipoyl dehydrogenase. | Tryptophan synthase. | 0.815 |
PTRG_01763 | PTRG_06494 | B2VSK7 | B2W936 | Dihydrolipoyl dehydrogenase. | Alanine aminotransferase 2. | 0.897 |
PTRG_01763 | PTRG_07718 | B2VSK7 | B2WCK9 | Dihydrolipoyl dehydrogenase. | Threonine aldolase. | 0.829 |
PTRG_01763 | PTRG_10051 | B2VSK7 | B2WJ92 | Dihydrolipoyl dehydrogenase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.672 |
PTRG_01763 | PTRG_11478 | B2VSK7 | B2WN29 | Dihydrolipoyl dehydrogenase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.890 |
PTRG_03081 | PTRG_01763 | B2W091 | B2VSK7 | Aspartate aminotransferase. | Dihydrolipoyl dehydrogenase. | 0.496 |
PTRG_03081 | PTRG_03987 | B2W091 | B2W0K2 | Aspartate aminotransferase. | Glutamate synthase. | 0.814 |
PTRG_03081 | PTRG_04082 | B2W091 | B2W0U7 | Aspartate aminotransferase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.930 |
PTRG_03081 | PTRG_06083 | B2W091 | B2W5S5 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.965 |
PTRG_03081 | PTRG_06211 | B2W091 | B2W653 | Aspartate aminotransferase. | Tryptophan synthase. | 0.626 |
PTRG_03081 | PTRG_06494 | B2W091 | B2W936 | Aspartate aminotransferase. | Alanine aminotransferase 2. | 0.911 |
PTRG_03081 | PTRG_10051 | B2W091 | B2WJ92 | Aspartate aminotransferase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.590 |
PTRG_03081 | PTRG_11478 | B2W091 | B2WN29 | Aspartate aminotransferase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.920 |
PTRG_03987 | PTRG_01763 | B2W0K2 | B2VSK7 | Glutamate synthase. | Dihydrolipoyl dehydrogenase. | 0.863 |
PTRG_03987 | PTRG_03081 | B2W0K2 | B2W091 | Glutamate synthase. | Aspartate aminotransferase. | 0.814 |
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